CDS

Accession Number TCMCG007C45995
gbkey CDS
Protein Id XP_009106188.1
Location complement(join(26697775..26697816,26697907..26697979,26698082..26698400,26698474..26698750,26698831..26698924,26698993..26699088,26699160..26699251,26699341..26699506,26699583..26699620))
Gene LOC103831989
GeneID 103831989
Organism Brassica rapa

Protein

Length 398aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009107940.3
Definition zinc finger CCCH domain-containing protein 16 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Zinc finger C-x8-C-x5-C-x3-H type (and similar)
KEGG_TC -
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14321        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900457        [VIEW IN EMBL-EBI]
GO:1900458        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAAAGGAGTTGTGCAGAAACTTTCAGCAAGGAAGTTGTAGGTATGGAGAAAGATGTAGATACCTTCATCCACAACAAACTAAACCAAACAACCCCTTCGGCTTCGGCACACAGCAGCAACAGAACAAGACTTCGAACAACCCTTTTGGATTCGGTGTACAAGGCGGTTCTAACTCCAGCAGACCAAATCAATCTCAGCAGCCTTTTCAGAACACATGGCAACGTAATCCTTCTAGTGGTAGTGGTGCTTCTACGCAGCAGTCTGGTAAACAGACTCAGCAGGCTGACCATAAATGCACGGATCCTGCTGCGTGTAAGAGGGTGATTCAAGAGGATCTTAAGAATGAGAGACCCATGTGGAAGCTCACTTGCTACGCTCACTGCAAACACCTTCCTTGTGACGTTTCTGGTGATATAAGCTACGAAGAGCTACGTGCCATGGCGTATGAAGAATCCAAACGAGGGATACCTCTACAGTCTATTGTTGAAAGGGAGAGGAATTTGCAAAACGCCAAAGTAGCTGAGTTTGAAAACTTTCTAAGGAGTCCATACAGAGGCGCTGTTACAGCCAATCAAACTCCTAGTATCTTCCCACCAGCTACTCAGGTCAACTCCTCCCCTCCAGGGGGATTCTCTGCCTTCAATCAACAACCAGCATTCCCCAACACCAACGCTGGTGGTGGACCTCCTAATCCTTTTGGGCGGTTTAATCAACAACCTAATGCTTTCAGCCTCAACACTCCTCAACCTGCTCCTTCAGGTCCTTCTGGTTTCCAGAGTCAACCATCATCGTTTGGACCTGGACCAGCTGCTCCATCTGCTTTCCAACCATCAGTATCGTTCAAGCCAGCATCGTTTGGACCTGGACCGGTTGCTCCCTCTGGCTTCCAGAGTCAGCCAGCATCGTTTGGACCTGGACCAGGACTCGCCACACCTCCACAGAACAGCAGCATCTTTCCTTCAGTGACCCCGACGCCGGCTTTTAATTCTAACCAGAATAATCAGACCGGTTTTAGTTTCAATTCCCCTGTTGCATCTTTCACTTCTCCTGCTGTAGACACAACAAACACACCTTCCGGAACCGAGCTACAAGCAGGAGGTGCCCCTGTTGATACTAGCATCTGGTTAAAGGAGAAATGGAATCCAGGAGAGATTCCAGAGCAAGCGCCGCCTGATGCATTTGTTCATCGATAA
Protein:  
MRKELCRNFQQGSCRYGERCRYLHPQQTKPNNPFGFGTQQQQNKTSNNPFGFGVQGGSNSSRPNQSQQPFQNTWQRNPSSGSGASTQQSGKQTQQADHKCTDPAACKRVIQEDLKNERPMWKLTCYAHCKHLPCDVSGDISYEELRAMAYEESKRGIPLQSIVERERNLQNAKVAEFENFLRSPYRGAVTANQTPSIFPPATQVNSSPPGGFSAFNQQPAFPNTNAGGGPPNPFGRFNQQPNAFSLNTPQPAPSGPSGFQSQPSSFGPGPAAPSAFQPSVSFKPASFGPGPVAPSGFQSQPASFGPGPGLATPPQNSSIFPSVTPTPAFNSNQNNQTGFSFNSPVASFTSPAVDTTNTPSGTELQAGGAPVDTSIWLKEKWNPGEIPEQAPPDAFVHR